Media 000006078: Calcaneus
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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GENERAL DETAILS Field Definitions

Media ID
000006078
Media type
Mesh
Object element or part
calcaneus
Object represented
Object taxonomy
Anchomomys frontanyensis
Side
Left
Orientation
--
Short description
Mesh File
Full description
Migrated MorphoSource 1 Media File Title: Mesh File Migrated MorphoSource 1 Media Group Title: surface mesh generated by scanning to half casts Migrated MorphoSource 1 Media Group Description: This media group does not include any raw microCT slices even though the data was generated by a microCT scanner. These data were with held because the scans were not made of the original specimens, they were made on overlapping half casts of the specimen. This is the best method of getting high resolution 3D images of specimens that are too dense to scan directly (as is the specimen represented by these media due to pore-filling hematite). "overlapping half surfaces" of each scanned cast were then made in Avizo. These surfaces were then cropped and then aligned and merged into the final result posted here using Geomagic. This is better than scanning a single two piece mold because it avoids flash line distortion.
Creator
--
Date created
--
Date uploaded
July 22, 2015

FILE OBJECT DETAILS Field Definitions

File name
Anchomomys_frontanyensis_IPS7987_calcaneus_flipped.ply
File format(s)
PLY
File size
5.97 MB
Points
91312
Polygons
176806
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.658, 4.113, 8.066
Centroid coordinates
3.360, 2.570, 6.224
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
--
IP holder
Institut Català de Paleontologia Miquel Crusafont (ICP), Cerdanyola del Vallès, Barcelona
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
(2) "El registro fósil de primates de la Península Ibérica durante el Cenozoico: paleobiología, biocronología y contexto paleoambiental" (CGL2014-54373-P). Ministerio de Economía y Competitividad. (3) "Grup de Paleoprimatologia i paleontologia humana PIPH" (2014 SGR 416 GRC). Generalitat de Catalunya. (4) "Estudi dels primats i faunes associades del Paleogen de Catalunya" (2014/100604). Generalitat de Catalunya.; (1) NSF BCS 1317525
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Judit Marigo provided access to these dataoriginally appearing in , the collection of which was funded by CGL2014-54373-P, financed by Ministerio de Economía y Competitividad (Spanish Government). The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ips:7987 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Doug Boyer, Judit Marigo, Callie Crawford
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
na
Projections
na
Voltage
na
Power
0.0
Amperage
na
Surrounding material
styrofoam
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000006078: Calcaneus [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Doug Boyer, Judit Marigo, Callie Crawford
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000006078: Calcaneus [Mesh] [Etc] (this media)