Media 000075891: Atlas
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

Project
· Public
Team
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000075891
Media type
Mesh
Object element or part
Atlas
Object represented
Object taxonomy
Lemur catta
Object organization
Side
--
Orientation
--
Short description
Smooth Surface Mesh
Full description
Migrated MorphoSource 1 Media File Title: Smooth Surface Mesh Migrated MorphoSource 1 Media Group Title: microCT Volume File and Derivative Mesh Files Migrated MorphoSource 1 Media File Description: Correct chirality Migrated MorphoSource 1 Media Group Description: Correct chirality
Creator
--
Date created
--
Date uploaded
April 23, 2019

FILE OBJECT DETAILS Field Definitions

File name
Fused_Aguilar_AMNH_170741_atlas.smooth.ply
File format(s)
PLY
File size
35.9 MB
Points
499988
Polygons
1000000
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
10.322, 10.697, 26.046
Centroid coordinates
35.155, 20.720, 50.879
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
AMNH Dept of Mammalogy
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Doug Boyer provided access to these data , the collection of which was funded by NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-170741 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Mackenzie Shepard
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
120
Power
0.01416
Amperage
118
Surrounding material
Air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000075888: Atlas, Cranium And Mandible [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Mackenzie Shepard
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000075888: Atlas, Cranium And Mandible [CTImageSeries] [Etc] was processed to create derived Media 000075891: Atlas [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Mackenzie Shepard
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000075891: Atlas [Mesh] [Etc] (this media)