Media 000108655: Skeleton
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000108655: Skeleton
Open Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
GENERAL DETAILS Field Definitions
Media ID
000108655
Media type
Volumetric Image Series
Object element or part
skeleton
Object represented
Object taxonomy
Barnardius zonarius
Object organization
Side
--
Orientation
--
Short description
--
Full description
Micro-CT volume and derivative mesh files
Creator
Benson, Roger
Date created
--
Date uploaded
March 11, 2020
FILE OBJECT DETAILS Field Definitions
File name
Barnardius_zonarius_NHMUK_S_1983.5_8bit_TIFFs.zip
File format(s)
ZIP archive, TIFF
File size
2.83 GB
Image width
1557
Image height
1784
Color space
BlackIsZero
Color depth
8
Compression
--
X pixel spacing
0.039695
Y pixel spacing
0.039695
Z pixel spacing
0.039695
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,715
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
Natural History Museum, London (Copyright and License)
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
Benson, Roger
Cite as
Roger Benson provided access to these data originally appearing in Bjarnason A, Benson RBJ. 2021. A 3D geometric morphometric dataset quantifying skeletal variation in birds. MorphoMuseuM. https://doi.org/10.18563/journal.m3.125, the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
nhmuk:zoo:S/1983.5.1
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)
Creator
Roger Benson, Tom Davies
Event date
February 08, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.354
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1601
Voltage
120
Power
--
Amperage
290
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000108655: Skeleton [CTImageSeries] [CT] (this media).
Processing Details Field Definitions
Creator
Roger Benson, Tom Davies
Event date
February 08, 2021
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000108655: Skeleton [CTImageSeries] [CT] (this media)