Media 000109591: Skull [Mesh] [CT]
Represents:
Biological Specimen
In Collection
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14 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT
COLLECTIONS MEDIA BELONGS TO
MEDIA TAGS
GENERAL DETAILS
Media ID
000109591
Media type
Mesh
Object element or part
skull
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
Benson, Roger
Date created
--
Date uploaded
March 13, 2020
FILE OBJECT DETAILS
File format(s)
application/ply
File size
333 MB
Points
4,279,363
Polygons
8,615,694
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
24.001, 20.628, 46.701
Centroid coordinates
54.051, 45.296, 29.835
Units of point coordinates
Mm
IMAGE ACQUISITION AND PROCESSING AT A GLANCE
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
OWNERSHIP AND PERMISSIONS
Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
University of Michigan Museum of Zoology
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
--
Cite as
Roger Benson provided access to these data originally appearing in Bjarnason A, Benson RBJ. 2021. A 3D geometric morphometric dataset quantifying skeletal variation in birds. MorphoMuseuM. https://doi.org/10.18563/journal.m3.125, the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS
MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
ummz:birds:201948
was imaged to create
undeposited raw media.
Imaging Details
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Computed Tomography in Earth & Environmental Sciences (CTEES) (University of Michigan)
Creator
Roger Benson, Tom Davies
Date
February 07, 2021
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
0.354
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1801
Voltage
130
Power
--
Amperage
290
Surrounding material
--
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000109590: Skeleton [CTImageSeries] [CT]
.
Processing Details
Creator
Roger Benson, Tom Davies
Date processed
February 07, 2021
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000109590: Skeleton [CTImageSeries] [CT]
was processed
to create
derived
Media 000109591: Skull [Mesh] [CT]
(this media).
Processing Details
Creator
TEMPO team
Date processed
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000109591: Skull [Mesh] [CT] (this media)