Media 000113753: Head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000113753
Media type
Volumetric Image Series
Object element or part
head
Object represented
Object taxonomy
ANELYTROPSIS PAPILLOSUS
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 2032\\r\\n\\r\\nMaisano:\\r\\nanelyB: Scans of the skull of Anelytropsis papillosus [TCWC 45501] for Jessie Maisano of The University of Texas at Austin. Specimen scanned by Jessie Maisano 23 March 2009.\\r\\n\\r\\nscan parameters: Xradia. 4X objective, 50kV, 10W, 7s acquisition time, detector 10.6 mm, source -67.4 mm, XYZ [-263, 4216, 0], camera bin 2, angles ±94, 471 views, 0.15 mm glass filter, destreak applied. Reconstructed with center shift -2, beam hardening 0, theta 93, byte scaling [-0.02, 0.2], binning 1, ring correction applied. Averaged multiple reference (1 frame acquired every 44 views, each for 5s). Post-recon ring correction applied by Jessie Maisano using the parameters oversampling = 3, binwidth = 15, sectors = 60. Total slices = 997. Voxels are 5.804 microns.\\r\\n
Creator
--
Date created
--
Date uploaded
March 25, 2020

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
918 MB
Image width
757
Image height
704
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.005804
Y pixel spacing
0.005804
Z pixel spacing
0.005804
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
997

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Biodiversity Research and Teaching Collections, Texas A&M University
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
EF-0334961, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: oUTCT provided access to these dataoriginally appearing in Gauthier et al., 2012, with data collection funded by NSF EF-0334961 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object TCWC:Herpetology:45501 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Jessie Maisano
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
7
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
none
Projections
471
Voltage
50
Power
0.01
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000113753: Head [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Jessie Maisano
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000113753: Head [CTImageSeries] [Etc] (this media)