Media 000114216: Turrbinates
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
ucla:HX 27 Vulpes macrotis
Managed by
Jessie Maisano

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Media produced from the same original imaging that created Media 000114216 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000114216
Media type
Volumetric Image Series
Object element or part
turrbinates
Object represented
ucla:HX 27
Object taxonomy
Vulpes macrotis
Object organization
UCLA Donald R. Dickey Bird and Mammal Collection
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 1283\\r\\n\\r\\nVan Valkenburgh:\\r\\nvulpF: Scans of a female skull (turbinates) of Vulpes macrotis (Riverside Co., CA, UCLA HX 27) for Blaire Van Valkenburgh of The University of California Los Angeles. Specimen scanned by Matthew Colbert 1 August 2005. \\r\\n\\r\\n16bit: 1024x1024 16-bit TIFF images. II, 180 kV, 0.133 mA, no filter, no offset, empty container wedge, slice thickness 1 line (= 0.03095 mm), S.O.D. 90 mm, 1800 views, 2 samples per view, inter-slice spacing 1 line (= 0.03095 mm), field of reconstruction 29 mm (maximum field of view 29.46449 mm), reconstruction offset 6600, scanner scale 6000, reconstruction scale 2000. Acquired with 25 slices per rotation. Drift- and ring removal processing done by Alison Mote based on correction of raw sinogram data using IDL routine “RK_SinoDeDrift” with parameter “driftlength=21” and “RK_SinoRingProcSimul” with default parameters. Reconstructed with an angle of -5 degrees. Rotation correction processing done by Alison Mote using IDL routine “DoRotationCorrection.” Total slices = 1775.\\r\\n
Creator
--
Date created
--
Date uploaded
April 07, 2020

FILE OBJECT DETAILS Field Definitions

File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
2.45 GB
Image width
1024
Image height
1024
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.028320
Y pixel spacing
0.028320
Z pixel spacing
0.030950
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,775

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jessie Maisano
Data uploaded by
Barbara Sulbaran
Publication status
Restricted Download
Download reviewer
Jessie Maisano
IP holder
University of California Los Angeles
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
IOB-0517748, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Blaire Van Valkenburgh provided access to these data , with data collection funded by NSF IOB-0517748 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M114216
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ucla:HX 27 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
1800
Voltage
180
Power
--
Amperage
133
Surrounding material
empty container
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000114216: Turrbinates [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000114216: Turrbinates [CTImageSeries] [Etc] (this media)