Media 000114284: Skull [CTImageSeries] [Etc]
Represents:
Biological Specimen
In Collection

FILE OBJECT DETAILS

Media ID
000114284
Media type
CTImageSeries
File format(s)
image/tiff
File size
816,217,478 bytes
Object element or part
skull
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 1054\\r\\n\\r\\nJamniczky:\\r\\nCuora: Scans of the skull and mandible of Cuora amboinensis (5077) for Heather Jamniczky of the University of Calgary. Specimen scanned by Matthew Colbert 4 August 2004. \\r\\n\\r\\n16bitrot: 1024x1024 16-bit TIFF images. II, 180 kV, 0.133 mA, no filter, air wedge, no offset, slice thickness 2 lines (= 0.068 mm), S.O.D. 98 mm, 1200 views, 2 samples per view, inter-slice spacing 2 lines (= 0.068 mm), field of reconstruction 32 mm (maximum field of view 32.08356 mm), reconstruction offset 7800, reconstruction scale 1780. Acquired with 15 slices per rotation. Drift- and ring-removal processing done by Rachel Racicot based on correction of raw sinogram data using IDL routines “RK_SinoDeDrift” with default parameters and “RK_SinoRingProcSimul” with parameters “binwidth=21, bestof5=21”. Rotation correction processing done by Rachel Racicot using IDL routine “DoRotationCorrection”. Total slices = 720.\\r\\n\\n\\nRelated URL: http://digimorph.org/specimens/Cuora_amboinensis/ Migrated MorphoSource 1 Media Group Description: Related URL: http://digimorph.org/specimens/Cuora_amboinensis/
Creator
--
Date created
--
Date uploaded
April 09, 2020
Image width
982
Image height
706
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.031
Y pixel spacing
0.031
Z pixel spacing
0.068
Pixel spacing units
Mm
Number of images in set
720

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
Chelonian Research Institute
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
Natural Sciences and Engineering Research Council of Canada, Alberta Ingenuity Fund, The Society of Vertebrate Palaeontology, The Chelonian Research Foundation, The Systematics Association, The Palaeontological Association, and the University of Calgary
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Heather Jamniczky provided access to these data , with data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object pchp:5077 was imaged to create undeposited raw media.

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Date
--
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Filter
--
Frame averaging
2
Projections
1200
Voltage
180
Power
--
Amperage
133
Surrounding material
air
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000114284: Skull [CTImageSeries] [Etc] (this media).

Processing Details

Creator
Matthew Colbert
Date processed
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource


Media 000114284: Skull [CTImageSeries] [Etc] (this media)