Media 000115182: Whole Body [CTImageSeries] [Etc]
Represents:
Biological Specimen
In Collection

0 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT

COLLECTIONS MEDIA BELONGS TO

MEDIA TAGS

FILE OBJECT DETAILS

Media ID
000115182
Media type
CTImageSeries
File format(s)
image/tiff
File size
200 MB
Object element or part
whole body
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive\\r\\n\\r\\nAlbert: \\r\\nSA187_: Scans of a single Apteronotus rostratus (SA187, male, 212mm) for James Albert of the University of Louisiana at Lafayette. Specimen scanned by Matthew Colbert on 25 May 2016.\\r\\n\\r\\n16bitTIFF: Scan parameters: NSI scanner. Fein Focus High Power source, 180 kV, 0.15 mA, aluminum filter, Perkin Elmer detector, 0.25 pF gain, 2 fps, 2x2 binning, no flip, source to object 200.0 mm, source to detector 1316.772 mm, continuous CT scan, 4 frames averaged, 0 skip frames, 705 projections, 6 gain calibrations, 5 mm calibration phantom, data range [-5.0, 49.0] (grayscales adjusted from NSI defaults), beam-hardening correction = 0.0. Voxel size = 49.0 ?m. Total slices = 920.\\r\\n
Creator
--
Date created
--
Date uploaded
April 29, 2020
Image width
303
Image height
422
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.049000
Y pixel spacing
0.049000
Z pixel spacing
0.049000
Pixel spacing units
Mm
Number of images in set
920

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
North Star Imaging N/R, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
Smithsonian Tropical Research Institute
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
DEB-1354511, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: James Albert provided access to these data , with data collection funded by NSF DEB-1354511 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object stri:sa:187 was imaged to create undeposited raw media.

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
North Star Imaging N/R
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Date
--
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
0.5
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
none
Projections
705
Voltage
180
Power
--
Amperage
150
Surrounding material
0.25 pF gain
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000115182: Whole Body [CTImageSeries] [Etc] (this media).

Processing Details

Creator
Matthew Colbert
Date processed
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource


Media 000115182: Whole Body [CTImageSeries] [Etc] (this media)