Media 000125120: Endocasts
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000125120
Media type
Mesh
Object element or part
Endocasts
Object represented
Object taxonomy
Glis glis glis
Object organization
Side
--
Orientation
--
Short description
Glis_glis_AMNH160904 endocast
Full description
Migrated MorphoSource 1 Media File Title: Glis_glis_AMNH160904 endocast Migrated MorphoSource 1 Media Group Title: Glis glis glis AMNH 160904 Migrated MorphoSource 1 Media File Description: From Bertrand et al., 2019. Endocranial shape variation in the squirrel-related clade and their fossil relatives using 3D geometric morphometrics: contributions of locomotion and phylogeny to brain shape. Journal of Zoology.
Creator
--
Date created
--
Date uploaded
July 11, 2020

FILE OBJECT DETAILS Field Definitions

File name
Glis_glis_AMNH160904-endocast.stl
File format(s)
STL
File size
646 MB
Points
1684584
Polygons
3370062
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
16.354, 12.612, 24.100
Centroid coordinates
12.654, 6.722, 29.290
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Restricted Download
IP holder
AMNH Dept of Mammalogy
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Ornella Bertrand and colleagues provided access to these dataOriginally appearing in Bertrand et al., 2019 , the collection of which was funded by. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object amnh:mammals:160904 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Keegan Selig, Justin Gladman
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000055339: Cranium [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Keegan Selig, Justin Gladman
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000055339: Cranium [CTImageSeries] [Etc] was processed to create derived Media 000125120: Endocasts [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Keegan Selig, Justin Gladman
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000125120: Endocasts [Mesh] [CT] (this media)