Media 000125839: Furcula
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000125839
Media type
Mesh
Object element or part
furcula
Object represented
Object taxonomy
Ardea alba
Object organization
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
Benson, Roger
Date created
--
Date uploaded
July 14, 2020

FILE OBJECT DETAILS Field Definitions

File name
Ardea_alba_UMZC_338H_furcula.ply
File format(s)
PLY
File size
18.6 MB
Points
263132
Polygons
527630
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
31.923, 33.626, 60.206
Centroid coordinates
125.552, 87.304, 30.776
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Cambridge Biotomography Centre (University of Cambridge)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
--
IP holder
Cambridge University Museum of Zoology
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
--
Cite as
Roger Benson provided access to these data originally appearing in Bjarnason A, Benson RBJ. 2021. A 3D geometric morphometric dataset quantifying skeletal variation in birds. MorphoMuseuM. https://doi.org/10.18563/journal.m3.125, the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UMZC:Vertebrates:338.H was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Cambridge Biotomography Centre (University of Cambridge)
Creator
Roger Benson, Ketura Smithson
Event date
February 07, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.708
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1080
Voltage
130
Power
--
Amperage
185
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000125835: Skeleton [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Roger Benson, Ketura Smithson
Event date
February 07, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000125835: Skeleton [CTImageSeries] [CT] was processed to create derived Media 000125839: Furcula [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
TEMPO team
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000125839: Furcula [Mesh] [Etc] (this media)