Media 000162989: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000162989: Whole Body
Restricted Download
Type
Volumetric Image Series
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
GENERAL DETAILS Field Definitions
Media ID
000162989
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Monodelphis domestica
Object organization
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 2378\\r\\n\\r\\nRowe:\\r\\nmonoB: Scans of a whole 10-day-old Monodelphis domestica (TMM M-7647) for Tim Rowe of UT DOGS. Specimen scanned by Jessie Maisano 4 January 2011.\\r\\n\\r\\nscan parameters: Xradia. 0.5X objective, 50kV, 5W, 3s acquisition time, detector 130.95 mm, source -37.5 mm, XYZ [0, 24193, 2394], camera bin 2, angles ±104, 729 views, no filter, dithering, no sample drift correction. Crop-and-fill plug-in applied. End reference (45 frames, each for 3s). Reconstructed with center shift 1.25, beam hardening 0, theta 0, byte scaling [-15, 90], binning 1, recon filter smooth (kernel size = 0.8). Total slices = 460. Voxels are 12.58 microns.\\r\\n
Creator
--
Date created
--
Date uploaded
October 01, 2020
FILE OBJECT DETAILS Field Definitions
File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
561 MB
Image width
950
Image height
960
Color space
BlackIsZero
Color depth
16
Compression
--
X pixel spacing
0.012580
Y pixel spacing
0.012580
Z pixel spacing
0.012580
Pixel spacing units
--
Slice thickness
--
Number of images in set
460
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
0
Number of processing events
1
(0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia microXCT-400, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Texas Memorial Museum
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Tim Rowe provided access to these data , with data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
tmm:M:7647
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Jessie Maisano
Event date
--
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
3
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
45 frames, each for 3s
Projections
729
Voltage
50
Power
0.005
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000162989: Whole [CTImageSeries] [Etc] (this media).
Processing Details Field Definitions
Creator
Jessie Maisano
Event date
--
Software
--
Description
--
Description attachment
None