Media 000165287: Element Unspecified
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000165287
Media type
Volumetric Image Series
Object element or part
--
Object represented
Object taxonomy
Branchiostoma caribaeum
Side
--
Orientation
--
Short description
Tomogram stack (16bit tiffs)
Full description
Migrated MorphoSource 1 Media File Title: Tomogram stack (16bit tiffs) Migrated MorphoSource 1 Media Group Title: PTA MicroCT volume and derivatives of uf:fish:1075, Branchiostoma caribaeum Migrated MorphoSource 1 Media Group Description: Phosphotungstic acid (PTA) stained for 14 days
Creator
--
Date created
--
Date uploaded
October 13, 2020

FILE OBJECT DETAILS Field Definitions

File name
UF-Fish-1075-PTA.zip
File format(s)
ZIP archive, TIFF
File size
1.86 GB
Image width
601
Image height
419
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.010334
Y pixel spacing
0.010334
Z pixel spacing
0.010334
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
4,588

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Fish:1075 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1300
Voltage
60
Power
0.0108
Amperage
180
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000165287: Element Unspecified [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000165287: Element Unspecified [CTImageSeries] [Etc] (this media)