Media 000165292: Whole Fish Skeleton
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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GENERAL DETAILS Field Definitions

Media ID
000165292
Media type
Volumetric Image Series
Object element or part
Whole fish skeleton
Object represented
Object taxonomy
Leocottus kesslerii
Object organization
Side
--
Orientation
--
Short description
CT Image Stack
Full description
Migrated MorphoSource 1 Media File Title: CT Image Stack Migrated MorphoSource 1 Media Group Title: Whole-body fish specimen Migrated MorphoSource 1 Media Group Description: Specimen standard length: 66.0722542mm
Creator
--
Date created
--
Date uploaded
October 14, 2020

FILE OBJECT DETAILS Field Definitions

File name
21_Lkessleri_106837_TBGroup_079_M.zip
File format(s)
ZIP archive, JPEG
File size
46.6 MB
Image width
631
Image height
748
Color space
YCbCr
Color depth
8
Compression
JPEG
X pixel spacing
0.035715
Y pixel spacing
0.035715
Z pixel spacing
0.035715
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,297

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
--
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF 1557147 to Michael Sandel and NSF DEB-1557149 to Andres Aguilar; NSF DBI-1701665
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Thaddaeus Buser provided access to these dataoriginally appearing in Genomic and morphological data reveal evolutionary relationships in the benthopelagic endemic Lake Baikal genus Cottocomephorus with data collection funded by NSF grant 1557147 to Michael Sandel and NSF grant DEB-1557149 to Andres Aguilar.. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object l-ms:70128 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
Thaddaeus Buser, Adam Summers
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
65
Power
--
Amperage
123
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000165292: Whole Fish Skeleton [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Thaddaeus Buser, Adam Summers
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000165292: Whole Fish Skeleton [CTImageSeries] [Etc] (this media)