Media 000170729: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000170729
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Macronycteris commersonii
Object organization
Side
--
Orientation
--
Short description
HRXCT scan - whole body
Full description
University of Texas High-Resolution X-ray CT Facility Archive 0813 Simmons: Hipposideros: Scans of a whole preserved specimen of Hipposideros commersoni (AMNH 268379; no locality info) for Dr. Nancy Simmons of the American Museum of Natural History. Scanned by Matthew Colbert 12 February 2003. Central ray offset correction (-0.5) applied by Matthew Colbert. whole/16bit: 1024x1024 16-bit TIFF images. II, 120 kV, 0.2 mA, no filter, empty container wedge, no offset, slice thickness = 1 line (= 0.086 mm), S.O.D. 251 mm, 1000 views, 3 samples per view, interslice spacing = 1 line (=0.086 mm), field of reconstruction 80.0 mm (maximum field of view 82.2536 mm), reconstruction offset 3000, reconstruction scale 1500. Acquired with 35 slices per rotation. Total slices = 1364.
Creator
--
Date created
February 12, 2003
Date uploaded
January 08, 2021

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
1.46 GB
Image width
1013
Image height
766
Color space
BlackIsZero
Color depth
16
Compression
--
X pixel spacing
0.078000
Y pixel spacing
0.078000
Z pixel spacing
0.086000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,364

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Restricted Download
IP holder
AMNH Dept of Mammalogy
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
DEB-9873663, DBI-1902242
Publisher
oUTCT PEN
Cite as
Nancy Simmons provided access to these data, with data collection funded by NSF DEB-9873663 and data upload to MorphoSource funded by DBI-1902242.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-268379 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
1000
Voltage
120
Power
--
Amperage
200
Surrounding material
empty container
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000170729: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000170729: Whole Body [CTImageSeries] [CT] (this media)