Media 000351282: Head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000351282
Media type
Volumetric Image Series
Object element or part
head
Object represented
Object taxonomy
Loxigilla noctis
Object organization
Side
--
Orientation
--
Short description
--
Full description
University of Texas High-Resolution X-ray CT Facility Archive Torres: L_noctis510969: Scan of the head of Loxigilla noctis (USNM 510969; St. Lucia) for Chris Torres of The University of Texas at Austin. Specimen scanned by Matthew Colbert on 3 May 2016. 16bitTIFF: Scan parameters: NSI scanner. Fein Focus High Power source, 150 kV, 0.1 mA, no filter, Perkin Elmer detector, 0.25 pF gain, 1 fps, 1x1 binning, no flip, source to object 154.0 mm, source to detector 1316.772 mm, continuous CT scan, no frames averaged, 0 skip frames, 2500 projections, 6 gain calibrations, 5 mm calibration phantom, data range [-10.0, 250.0] (grayscales adjusted from NSI defaults), beam-hardening correction = 0.0. Specimen reoriented prior to reconstruction. Voxel size = 14.1 μm. Total slices = 1806.
Creator
--
Date created
--
Date uploaded
March 22, 2021

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
5.03 GB
Image width
1038
Image height
1576
Color space
BlackIsZero
Color depth
16
Compression
--
Series type
Reconstructed image stack
X pixel spacing
0.014100
Y pixel spacing
0.014100
Z pixel spacing
0.014100
Pixel spacing units
Mm
Slice thickness
0.0141
Number of images in set
1,818

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Smithsonian Institution, National Museum of Natural History
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
DBI-1902242
Publisher
oUTCT PEN
Cite as
Chris Torres provided access to these data, with upload to MorphoSource funded by DBI-1902242
Media preview mode
--
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:BIRDS:USNM 510970 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Colbert, Matthew
Event date
May 02, 2016
Software
--
Description
head
Description attachment
None
Reference attachment
None
Exposure time
1s
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
2625
Voltage
150 kV
Power
--
Amperage
0.1 mA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000351282: Head [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
March 22, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000351282: Head [CTImageSeries] [CT] (this media)