Media 000363348: Femur
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000363348
Media type
Mesh
Object element or part
Femur
Object represented
Object taxonomy
Saguinus fuscicollis
Side
Left
Orientation
--
Short description
--
Full description
--
Creator
--
Date created
--
Date uploaded
May 13, 2021

FILE OBJECT DETAILS Field Definitions

File name
L.fuscus_FMNH_71011_femur_500kR.ply
File format(s)
PLY
File size
16.8 MB
Points
250003
Polygons
499996
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
17.092, 12.046, 64.077
Centroid coordinates
8.152, 6.410, 32.833
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (4 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
IP holder
--
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:Mammals:71011 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Neander April
Event date
June 02, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1800
Voltage
100
Power
--
Amperage
165
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 4 activities to create derived Media 000363348: Femur [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Botton-Divet, Leo
Event date
May 13, 2021
Software
--
Description
--
Description attachment
None

Processing Activity 1: Crop

Software
Fiji
Description

Processing Activity 2: Reconstructed Tomography to Mesh

Software
Avizo
Description

Processing Activity 3: Smoothing/Noise Reduction

Software
Meshlab
Description
Removal of the internal structure

Processing Activity 4: Smoothing/Noise Reduction

Software
Geomagic
Description
Smoothing and decimation

Media produced by this event on MorphoSource

Media 000363348: Femur [Mesh] [CT] (this media)