Media 000382584: Mandible
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000382584: Mandible
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
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Project
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Team
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000382584
Media type
Mesh
Object element or part
mandible
Object represented
Object taxonomy
Tarsius pumilus
Object organization
Side
Midline
Orientation
--
Short description
--
Full description
--
Creator
zach klukkert
Date created
September 09, 2021
Date uploaded
September 10, 2021
FILE OBJECT DETAILS Field Definitions
File name
Fused_Tarsius_Mandible_2.smooth.ply
File format(s)
PLY
File size
28.6 MB
Points
399844
Polygons
799966
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
17.266, 11.958, 16.498
Centroid coordinates
9.408, 10.254, 9.469
Units of point coordinates
Mm
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(4 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x, AMNH Microscopy and Imaging Facility (MIF) (American Museum of Natural History)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
AMNH Dept of Mammalogy
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS-1552848
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
AMNH:Mammals:M-196477
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x
Device facility
AMNH Microscopy and Imaging Facility (MIF) (American Museum of Natural History)
Creator
Zach Klukkert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 3 activities
to create
derived
Media 000382581: Mandible [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
zach klukkert, doug boyer
Event date
--
Software
--
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
Description
Processing Activity 2: Transform: Rotation
Software
imagej
Description
Processing Activity 3: Crop
Software
imagej
Description
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000382581: Mandible [CTImageSeries] [CT]
was processed
with 1 activity
to create
derived
Media 000382584: Mandible [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
zach klukkert
Event date
--
Software
Avizo
Description
--
Description attachment
None
Processing Activity 1: Point Cloud to Mesh
Software
Avizo
Description
Media produced by this event on MorphoSource
Media 000382584: Mandible [Mesh] [CT] (this media)