Media 000387914: Day 19 Embryo In Egg [CTImageSeries] [CT]
Represents:
Biological Specimen
Not in Collection

0 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT

COLLECTIONS MEDIA BELONGS TO

MEDIA TAGS

FILE OBJECT DETAILS

Media ID
000387914
Media type
CTImageSeries
File format(s)
image/tiff
File size
844,081,988 bytes
Object element or part
day 19 embryo in egg
Side
--
Orientation
--
Short description
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Full description
Rowe: 19a: Scans of an egg of Gallus gallus (19a; frozen, one of chicken egg series at day 19 after laying, egg thawed during course of scan) for Dr. Timothy Rowe of the Department of Geological Sciences, The University of Texas at Austin. Specimen scanned by Matthew Colbert 2 July 2003. 16bitds: 1024x1024 16-bit TIFF images. II, 120 kV, 0.2 mA, no filter, empty container wedge, no offset, slice thickness 2 lines (= 0.1005 mm), S.O.D. 145 mm, 1600 views, 3 samples per view, inter-slice spacing 2 lines (= 0.1005 mm), field of reconstruction 42 mm (maximum field of view 47.47057 mm), reconstruction offset 4300, reconstruction scale 1500. Reconstructed off-center: x = -2.4, y = -0.7. Acquired with 15 slices per rotation. Flash-removal processing done by Rachel Racicot based on correction of raw sinogram data using IDL routine “RK_SinoDeSpike” with default parameters. Total slices = 540.
Creator
Matthew Colbert
Date created
July 02, 2003
Date uploaded
September 30, 2021
Image width
1024
Image height
1024
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
Series type
Reconstructed image stack
X pixel spacing
0.041
Y pixel spacing
0.041
Z pixel spacing
0.1005
Pixel spacing units
Mm
Number of images in set
600

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
Texas Memorial Museum
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
IIS-0208675, DBI-1902242
Publisher
oUTCT PEN
Cite as
oUTCT provided access to these data, with data collection funded by NSF IIS-0208675 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object tmm:vpl:uncatalogued was imaged to create undeposited raw media.

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
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Date
--
Software
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Description
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Imaging event description attachment
None
Imaging event reference attachment
None
Exposure time
--
Flux normalization
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Pixel spacing calibration
--
Shading correction
--
Filter
--
Frame averaging
3
Projections
1600
Voltage
120
Power
--
Amperage
200
Surrounding material
empty container
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
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Detector pixels Y
--
Detector pixel size Y
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Detector configuration
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Source object distance
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Source detector distance
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Target material
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Rotation number
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Phase contrast
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Optical magnification
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Acquisition type
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STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000387914: Day 19 Embryo In Egg [CTImageSeries] [CT] (this media).

Processing Details

Creator
Date processed
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource


Media 000387914: Day 19 Embryo In Egg [CTImageSeries] [CT] (this media)