Media 000411735: Jaw Fragment
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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No collections found.

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000411735
Media type
Mesh
Object element or part
Jaw Fragment
Object represented
Object taxonomy
Macrotarsius jepseni
Side
--
Orientation
--
Short description
--
Full description
--
Creator
--
Date created
January 07, 2022
Date uploaded
January 07, 2022

FILE OBJECT DETAILS Field Definitions

File name
Aguilar_YPM_VPPU_016431_jaw_mid_.smooth.ply
File format(s)
PLY
File size
36 MB
Points
500266
Polygons
999806
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
9.721, 8.401, 30.286
Centroid coordinates
4.471, 4.099, 13.887
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (4 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
Yale Peabody Museum of Natural History
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ypm:vp:ypm vppu 016431 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
110
Power
14.3
Amperage
130
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 3 activities to create derived Media 000411729: Jaw Fragment [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstruction

Software
Description

Processing Activity 2: Crop

Software
Image J
Description

Processing Activity 3: Transform: Reflection

Software
Image J
Description

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000411729: Jaw Fragment [CTImageSeries] [CT] was processed with 1 activity to create derived Media 000411735: Jaw Fragment [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Avizo
Description

Media produced by this event on MorphoSource

Media 000411735: Jaw Fragment [Mesh] [CT] (this media)