Media 000413023: Pelvis, Femur
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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Media Display

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In Collections

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GENERAL DETAILS Field Definitions

Media ID
000413023
Media type
Mesh
Object element or part
Pelvis; Femur
Object represented
Object taxonomy
Bachia intermedia
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
S. Swank
Date created
April 27, 2021
Date uploaded
January 12, 2022

FILE OBJECT DETAILS Field Definitions

File name
--
File format(s)
--
File size
--
Points
--
Polygons
--
Map type
--
UV coordinates
--
Vertex color
--
Bounding box dimensions
--
Centroid coordinates
--
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
1 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2, LUC Department of Biology (Loyola University Chicago)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
IP holder
--
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DEB-1456462
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2
Device facility
LUC Department of Biology (Loyola University Chicago)
Creator
S. Swank
Event date
June 22, 2021
Software
InVesalius 3.1; MeshLab 2020.12
Description
--
Description attachment
None
Reference attachment
None
Exposure time
4 min
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
65-70 kV
Power
--
Amperage
100-114 mA
Surrounding material
Plastic bag
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

Media produced by this event on MorphoSource

STEP 2: IMAGE PROCESSING

Raw Media 000413020: Femur, Pelvis [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000413023: Femur, Pelvis [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
S. Swank
Event date
April 27, 2021
Software
MeshLab 2020.12
Description
--
Description attachment
None

Processing Activity 1: Photos to Mesh

Software
InVesalius
Description
created .ply file using a manual threshold

Processing Activity 2:

Software
Meshlab
Description
added landmarks, removed background

Media produced by this event on MorphoSource

Media 000413023: Femur, Pelvis [Mesh] [CT] (this media)