Media 000414040: Femur, Pelvis
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000414040: Femur, Pelvis
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
GENERAL DETAILS Field Definitions
Media ID
000414040
Media type
Mesh
Object element or part
Femur; Pelvis
Object represented
Object taxonomy
Bachia intermedia
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
S. Swank
Date created
April 13, 2021
Date uploaded
January 14, 2022
FILE OBJECT DETAILS Field Definitions
File name
Bi.183995.200.clean.ply
File format(s)
PLY
File size
44.5 MB
Points
3708857
Polygons
164002
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
12.983, 8.380, 9.665
Centroid coordinates
8.975, -6.519, 5.437
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
1
(2 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2, LUC Department of Biology (Loyola University Chicago)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
President and Fellows of Harvard College (Copyright and License)
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DEB-1456462
Publisher
Museum of Comparative Zoology, Harvard University
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
MCZ:Herp:R-183995
was imaged to create
raw
Media 000414037: Femur, Pelvis [CTImageSeries] [CT].
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2
Device facility
LUC Department of Biology (Loyola University Chicago)
Creator
S. Swank
Event date
April 13, 2021
Software
MeshLab 2020.12; InVesalius 3.1
Description
--
Description attachment
None
Reference attachment
None
Exposure time
4 min
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
65-70 kV
Power
--
Amperage
100-114 mA
Surrounding material
Plastic bag
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
Media produced by this event on MorphoSource
STEP 2: IMAGE PROCESSING
Raw
Media 000414037: Femur, Pelvis [CTImageSeries] [CT]
was processed
with 2 activities
to create
derived
Media 000414040: Femur, Pelvis [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
S. Swank
Event date
April 13, 2021
Software
MeshLab 2020.12
Description
--
Description attachment
None
Processing Activity 1: Photos to Mesh
Software
InVesalius
Description
created .ply file using a manual threshold
Processing Activity 2:
Software
Meshlab
Description
added landmarks, removed background
Media produced by this event on MorphoSource
Media 000414040: Femur, Pelvis [Mesh] [CT] (this media)