Media 000414454: Navicular [Mesh] [CT]
Represents:
Biological Specimen
In Collection
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1 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT
COLLECTIONS MEDIA BELONGS TO
MEDIA TAGS
FILE OBJECT DETAILS
Media ID
000414454
Media type
Mesh
File format(s)
application/ply
File size
4.88 MB
Object element or part
navicular
Side
Right
Orientation
--
Short description
--
Full description
--
Creator
doug boyer
Date created
January 16, 2022
Date uploaded
January 16, 2022
Points
73,313
Polygons
146,622
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
3.983, 4.563, 4.501
Centroid coordinates
35.805, 29.144, 19.891
Units of point coordinates
Mm
IMAGE ACQUISITION AND PROCESSING AT A GLANCE
Number of parent media
1
Number of processing events
2
(4 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Share Materials Instrumentation Facility (SMiF) (Duke University)
OWNERSHIP AND PERMISSIONS
Data managed by
Data uploaded by
Download permission
Publish with Open Download
Download reviewer
IP holder
AMNH Dept of Mammalogy
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1552848 (to DM Boyer)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
AMNH:Mammals:M-200525
was imaged to create
undeposited raw media.
Imaging Details
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Share Materials Instrumentation Facility (SMiF) (Duke University)
Creator
--
Date
--
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
120
Power
14.4
Amperage
120
Surrounding material
air
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 3 activities
to create
derived
Media 000410491: Feet [CTImageSeries] [CT]
.
Processing Details
Creator
Date processed
--
Software
--
Description
--
Description attachment
None
Processing Activity 1: Reconstruction
Software
Description
Processing Activity 2: Crop
Software
Image J
Description
Processing Activity 3: Transform: Reflection
Software
Image J
Description
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000410491: Feet [CTImageSeries] [CT]
was processed
with 1 activity
to create
derived
Media 000414454: Navicular [Mesh] [CT]
(this media).
Processing Details
Creator
doug boyer
Date processed
2022-01-16
Software
avizo
Description
--
Description attachment
None
Processing Activity 1: Reconstructed Tomography to Mesh
Software
avizo
Description
constrained smoothing applied
Media produced by this event on MorphoSource
Media 000414454: Navicular [Mesh] [CT] (this media)