Media 000415865: Whole Body
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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Project
· Public

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No tags found.

GENERAL DETAILS Field Definitions

Media ID
000415865
Media type
Mesh
Object element or part
whole body
Object represented
Object taxonomy
Triprion spatulatus
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Emily Braker
Date created
December 22, 2021
Date uploaded
January 24, 2022

FILE OBJECT DETAILS Field Definitions

File name
UCM_HERP_39768_Diaglena_spatulata_mesh.stl
File format(s)
STL
File size
686 MB
Points
1897223
Polygons
3738874
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
0.052, 0.084, 0.033
Centroid coordinates
0.030, 0.060, 0.017
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Colorado Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
University of Colorado Museum of Natural History
Cite as
UCM Herp [catalog number]
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
UCM:Herp:39768

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCM:Herp:UCM:Herp:39768 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm)
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Coulombe, Jennifer
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
2.7
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
1601
Voltage
150
Power
0.01005
Amperage
0.067
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000413420: Whole Body [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Coulombe, Jennifer
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000413420: Whole Body [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000415865: Whole Body [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Emily Braker
Event date
December 22, 2021
Software
Dragonfly
Description
mesh
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Dragonfly
Description

Processing Activity 2: Simplification

Software
Dragonfly
Description
decimated mesh

Media produced by this event on MorphoSource

Media 000415865: Whole Body [Mesh] [CT] (this media)