Media 000417930: Whole Specimen
Open Download
Type Other
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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Media Display

Media preview disabled by data contributor.

In Collections

Project
· Public

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GENERAL DETAILS Field Definitions

Media ID
000417930
Media type
Other
Object element or part
Whole specimen
Object represented
Object taxonomy
Oncabocarpum decaisneanum
Object organization
Side
NotApplicable
Orientation
--
Short description
Volume render of dataset F29
Full description
Volume render images of dataset F29 using Drishti.
Creator
Alan Spencer
Date created
April 04, 2018
Date uploaded
January 30, 2022

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, PNG
File size
8.46 MB

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology HMX ST 225, NHMUK Imaging and Analysis Centre (The Natural History Museum, London)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Thumbnail Only
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object mhnan:2011-pb:246 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology HMX ST 225
Device facility
NHMUK Imaging and Analysis Centre (The Natural History Museum, London)
Creator
Alan Spencer
Event date
March 05, 2015
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
708.00 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
3142
Voltage
200
Power
--
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
Transmission
Detector type
Direct (X-Ray photoconductor)
Detector pixels X
2000
Detector pixels size X
0.2
Detector pixels Y
2000
Detector pixels size Y
0.2
Detector configuration
Slot (scanned slot, slit, or spot)
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
No
Optical magnification
--
Acquisition type
Sequenced

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000417927: Whole Specimen [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Alan Spencer
Event date
April 04, 2018
Software
--
Description
Cropped dataset containing specimen. BMP image stack created from VOL file.
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000417927: Whole Specimen [CTImageSeries] [CT] was processed with 1 activity to create derived Media 000417930: Whole Specimen [Other] [CT] (this media).

Processing Details Field Definitions

Creator
Alan Spencer
Event date
April 04, 2018
Software
Drishti
Description
Drishti volume rendered images of the dataset.
Description attachment
None

Processing Activity 1:

Software
Drishti
Description

Media produced by this event on MorphoSource

Media 000417930: Whole Specimen [Other] [CT] (this media)