Media 000419264: Element Unspecified
Open Download
Type Mesh
Modality Confocal Image Stacking
Media represents biological specimen
Managed by

Media Display

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GENERAL DETAILS Field Definitions

Media ID
000419264
Media type
Mesh
Object element or part
--
Object represented
Object taxonomy
Taxonomy indet.
Side
--
Orientation
--
Short description
3D blender rendering of Carnegie stage 5 marmoset embryo derived from confocal imaging stacks
Full description
--
Creator
--
Date created
February 04, 2022
Date uploaded
February 03, 2022

FILE OBJECT DETAILS Field Definitions

File name
CS5_embryo_model.obj
File format(s)
OBJ
File size
11.8 MB
Points
9566
Polygons
9565
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
270.482, 108.616, 420.695
Centroid coordinates
7.958, 0.351, 13.641
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
Confocal Image Stacking
Device
Leica Inverted SP8, Cambridge Department of Physiology, Development, and Neuroscience (University of Cambridge)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
Wellcome Trust Sir Henry Dale Fellowship (RG89228)
Publisher
Nature
Cite as
Bergmann et al. (2022)
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object pdn:pe-pi was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
Confocal Image Stacking
Device
Leica Inverted SP8
Device facility
Cambridge Department of Physiology, Development, and Neuroscience (University of Cambridge)
Creator
Erin Slatery and Sophie Bergmann
Event date
June 01, 2020
Software
Blender
Description
Blender model of CS5 embryo from confocal stack images
Description attachment
None
Reference attachment
None

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000419264: Element Unspecified [Mesh] [Confocal] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000419264: Element Unspecified [Mesh] [Confocal] (this media)