Media 000431622: Femur, Pelvis [Mesh] [CT]
Represents:
Biological Specimen
In Collection

1 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT

MEDIA TAGS

GENERAL DETAILS

Media ID
000431622
Media type
Mesh
Object element or part
Femur; Pelvis
Side
--
Orientation
--
Short description
--
Full description
--
Creator
S. Swank
Date created
February 17, 2021
Date uploaded
March 16, 2022

FILE OBJECT DETAILS

File format(s)
application/ply
File size
8.93 MB
Points
149,597
Polygons
259,421
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
27.276, 37.291, 38.746
Centroid coordinates
38.411, -32.594, 20.569
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
1
Number of processing events
1 (2 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2, LUC Department of Biology (Loyola University Chicago)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DEB-1456462
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Herpetology:R-141467 was imaged to create raw media Media 000431619: Femur, Pelvis [CTImageSeries] [CT] .

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2
Device facility
LUC Department of Biology (Loyola University Chicago)
Creator
S. Swank
Date
February 17, 2021
Software
InVesalius 3.1; MeshLab 2020.12
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
4 min
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
65-70 kV
Power
--
Amperage
100-114 mA
Surrounding material
Plastic bag
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

Media produced by this event on MorphoSource

STEP 2: IMAGE PROCESSING

Raw Media 000431619: Femur, Pelvis [CTImageSeries] [CT] was processed with 2 activities to create derived Media 000431622: Femur, Pelvis [Mesh] [CT] (this media).

Processing Details

Creator
S. Swank
Date processed
February 17, 2021
Software
InVesalius 3.1
Description
--
Description attachment
None

Processing Activity 1: Photos to Mesh

Software
InVesalius
Description
created .ply file using a manual threshold

Processing Activity 2:

Software
Meshlab
Description
added landmarks, removed background

Media produced by this event on MorphoSource


Media 000431622: Femur, Pelvis [Mesh] [CT] (this media)