Media 000432861: Plethodon Vehiculum – Body Cavity
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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GENERAL DETAILS Field Definitions

Media ID
000432861
Media type
Volumetric Image Series
Object element or part
Plethodon vehiculum – Body cavity
Object represented
Object taxonomy
Plethodon vehiculum
Object organization
Side
--
Orientation
--
Short description
Plethodon vehiculum – body cavity
Full description
Diffusible iodine-based contrast-enhanced CT scan of the liver and body cavity of Plethodon vehiculum. Specimen ID MWI-0041 in a series of 3 individuals.
Creator
MW Itgen; DS Siegel
Date created
--
Date uploaded
March 29, 2022

FILE OBJECT DETAILS Field Definitions

File name
Plethodon_vehiculum_Vehic1_Liver.zip
File format(s)
ZIP archive, BMP
File size
450 MB
Image width
504
Image height
3596
Color space
--
Color depth
8
Compression
None; BI_RGB; 0
Series type
Reconstructed image stack
X pixel spacing
0.014900
Y pixel spacing
0.014900
Z pixel spacing
0.014900
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,213

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173, Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CSU:MWI:0041 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Bruker SkyScan 1173
Device facility
Karel F. Liem Bioimaging Facility of Friday Harbor Labs (University of Washington)
Creator
DS Siegel; MW Itgen
Event date
--
Software
--
Description
Diffusible iodine-based contrast-enhanced CT scan of the liver and body cavity of Plethodon vehiculum. Specimen ID MWI_Vehic1 in a series of 3 individuals.
Description attachment
None
Reference attachment
None
Exposure time
900
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
85
Power
--
Amperage
90
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000432861: Plethodon Vehiculum – Body Cavity [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000432861: Plethodon Vehiculum – Body Cavity [CTImageSeries] [CT] (this media)