Media 000439468: Head
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000439468
Media type
Volumetric Image Series
Object element or part
head
Object represented
Object taxonomy
Thamnophis nigronuchalis
Object organization
Side
--
Orientation
--
Short description
microCT volume, zipped 16-bit tiff stack
Full description
Migrated MorphoSource 1 Media Group Title: microCT volume, zipped 16-bit tiff stack Migrated MorphoSource 1 Media File Description: Data inverted following reconstruction Record created by batch submission.
Creator
--
Date created
--
Date uploaded
May 04, 2022

FILE OBJECT DETAILS Field Definitions

File name
UCM_HERP_65489_Thamnophis_nigronuchalis.zip
File format(s)
ZIP archive, TIFF
File size
2 GB
Image width
1119
Image height
1546
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.015856
Y pixel spacing
0.015856
Z pixel spacing
0.015856
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
772

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Colorado Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oMeso PEN NSF DBI-2001474; oVert TCN partner NSF DBI-1701714
Publisher
--
Cite as
University of Colorado Museum of Natural History provided access to these data with data collection funded by NSF 2001474. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCM:Herp:UCM:Herp:65489 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm)
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Braker, Emily
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
1.799999952
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
1601
Voltage
120
Power
1.0e-05
Amperage
83.33333333
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000439468: Head [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Braker, Emily
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000439468: Head [CTImageSeries] [CT] (this media)