Media 000448363: Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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GENERAL DETAILS Field Definitions

Media ID
000448363
Media type
Volumetric Image Series
Object element or part
Whole body
Object represented
Object taxonomy
Anilios erycinus
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Jaimi Gray
Date created
June 16, 2022
Date uploaded
June 29, 2022

FILE OBJECT DETAILS Field Definitions

File name
UF-herp-113561-body.zip
File format(s)
ZIP archive, TIFF
File size
979 MB
Image width
1102
Image height
1086
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.016234
Y pixel spacing
0.016234
Z pixel spacing
0.016234
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
2,782

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History, University of Florida
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:Herp:113561 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
June 14, 2022
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1800
Voltage
70 kV
Power
--
Amperage
200 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000448363: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
June 16, 2022
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000448363: Whole Body [CTImageSeries] [CT] (this media)