Media 000450259: Femur
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000450259: Femur
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Login or create an account to download files
GENERAL DETAILS Field Definitions
Media ID
000450259
Media type
Mesh
Object element or part
femur
Object represented
Object taxonomy
Saimiri sciureus
Object organization
Side
Left
Orientation
--
Short description
from articulated individual
Full description
--
Creator
doug boyer
Date created
July 14, 2022
Date uploaded
July 15, 2022
FILE OBJECT DETAILS Field Definitions
File name
MCZ_4245_Saimiri_femur.ply
File format(s)
PLY
File size
31.8 MB
Points
443514
Polygons
887024
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
65.352, 26.948, 73.505
Centroid coordinates
96.103, 23.093, 91.848
Units of point coordinates
Mm
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(1 step)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
President and Fellows of Harvard College (Copyright and License)
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1552848 (to DM Boyer)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
MCZ:Mamm:4245
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Mackenzie Shepard
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
180
Power
0.023579999999999997
Amperage
131
Surrounding material
Air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000073027: Full Body [CTImageSeries] [Etc].
Processing Details Field Definitions
Creator
Mackenzie Shepard
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000073027: Full Body [CTImageSeries] [Etc]
was processed
with 1 activity
to create
derived
Media 000450259: Femur [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
doug boyer
Event date
July 14, 2022
Software
avizo
Description
--
Description attachment
None
Processing Activity 1: Reconstructed Tomography to Mesh
Software
avizo
Description
used segmentation editor to extract left femur
Media produced by this event on MorphoSource
Media 000450259: Femur [Mesh] [CT] (this media)