Media 000458534: Carpometacarpus
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000458534: Carpometacarpus
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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GENERAL DETAILS Field Definitions
Media ID
000458534
Media type
Mesh
Object element or part
Carpometacarpus
Object represented
Object taxonomy
Xenops minutus
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
Lizzy Steell
Date created
August 11, 2021
Date uploaded
September 01, 2022
FILE OBJECT DETAILS Field Definitions
File name
Xenops_minutus_NHMUK_1974.4.44_cmc.stl
File format(s)
STL
File size
6.38 MB
Points
66623
Polygons
133690
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
4.586, 6.742, 7.919
Centroid coordinates
-6.860, -3.651, 11.869
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(2 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Nikon Metrology (Nikon Metrology Inc.)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
Natural History Museum UK
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
UKRI Future Leaders Fellowship MR/S032177/1
Publisher
Lizzy Steell
Cite as
Steell, E.M., Nguyen, J.M.T., Benson, R.B.J. & Field, D.J (2022) Comparative anatomy of the passerine carpometacarpus helps illuminate the early fossil record of crown Passeriformes. Journal of Anatomy, 00, 1–15. Available from: https://doi.org/10.1111/joa.13761
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
nhm-uk:zoology:1974.4.44
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Nikon Metrology (Nikon Metrology Inc.)
Creator
Brett Clark; Vincent Fernandez
Event date
April 26, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
354 s
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
2100
Voltage
70 kV
Power
30.03 W
Amperage
429 uA
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
116.85
Source detector distance
--
Target material
Tungsten
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
with 2 activities
to create
derived
Media 000457880: Whole Skeleton [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
Lizzy Steell
Event date
August 11, 2021
Software
VGSTUDIO MAX
Description
file reduction
Description attachment
None
Processing Activity 1: Bit Depth Change
Software
ImageJ
Description
changing from 16-bit to 8-bit
Processing Activity 2: Simplification
Software
VGSTUDIO MAX
Description
cropping and resampling resolution
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000457880: Whole Skeleton [CTImageSeries] [CT]
was processed
to create
derived
Media 000458534: Carpometacarpus [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Lizzy Steell
Event date
August 11, 2021
Software
VGSTUDIO MAX
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000458534: Carpometacarpus [Mesh] [CT] (this media)