Media 000480884: Whole Body
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000480884: Whole Body
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Project
· Public
Team
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000480884
Media type
Mesh
Object element or part
whole body
Object represented
Object taxonomy
Dryophytes arenicolor
Object organization
Side
--
Orientation
--
Short description
--
Full description
mesh from microCT volume, data inverted following CT scan
Record created by batch submission.
Creator
Pittman, Cameron
Date created
November 06, 2022
Date uploaded
November 09, 2022
FILE OBJECT DETAILS Field Definitions
File name
UCM_HERP_8241_Hyla_arenicolor_mesh.stl
File format(s)
STL
File size
601 MB
Points
1574934
Polygons
3151952
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
0.002, 0.005, 0.006
Centroid coordinates
0.001, 0.002, 0.003
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Colorado Museum of Natural History
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oVert TCN partner NSF DBI-1701714; oMeso PEN NSF DBI-2001474
Publisher
University of Colorado Museum of Natural History
Cite as
UCM [catalog number]
Media preview mode
Interactive/Embeddable
Additional usage agreement
None
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
UCM:Herp:UCM:Herp:8241
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm)
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Green, Mariah
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.800000012
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
3201
Voltage
120
Power
0.009960000038
Amperage
0.083
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000386876: Whole Body [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
Green, Mariah
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000386876: Whole Body [CTImageSeries] [CT]
was processed
to create
derived
Media 000480884: Whole Body [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Pittman, Cameron
Event date
November 06, 2022
Software
Dragonfly
Description
Reconstructed tomography to mesh, with smoothing and noise reduction
Description attachment
None
Media produced by this event on MorphoSource
Media 000480884: Whole Body [Mesh] [CT] (this media)