Media 000528388: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

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GENERAL DETAILS Field Definitions

Media ID
000528388
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Aethopyga siparaja mangini
Side
--
Orientation
--
Short description
zipped tiff stack
Full description
microCT volume and derivatives, fluid-preserved bird, seems to have damage to the top of its skull/some parts are missing/seem to be smashed
Creator
Natale, Rossy
Date created
May 17, 2023
Date uploaded
May 31, 2023

FILE OBJECT DETAILS Field Definitions

File name
FMNH_B_97195_Aethopyga_ImageStack.zip
File format(s)
ZIP archive, TIFF
File size
92.8 MB
Image width
378
Image height
375
Color space
BlackIsZero
Color depth
16
Compression
PackBits
X pixel spacing
0.055947
Y pixel spacing
0.055947
Z pixel spacing
0.055947
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,254

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
IP holder
Field Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DBI-1701714; oVert TCN; NSF DBI-1702421
Publisher
--
Cite as
Field Museum of Natural History provided access to these data , the collection of which was funded by oVert TCN. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object FMNH:Birds:97195 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s
Device facility
UChicago PaleoCT (University of Chicago)
Creator
Magallanes, Isaac
Event date
May 17, 2023
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.25
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
500
Voltage
80
Power
0.0168
Amperage
210
Surrounding material
Air
X-ray tube type
240
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000528388: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Natale, Rossy
Event date
May 17, 2023
Software
VGStudio Max 3.3.0
Description
calibrated histogram to highest and lowest densities, cropped ROI down to the specimen
Description attachment
None

Media produced by this event on MorphoSource

Media 000528388: Whole Body [CTImageSeries] [CT] (this media)