Media 000574254: Entire Specimen
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000574254
Media type
Volumetric Image Series
Object element or part
entire specimen
Object represented
Object taxonomy
Pseudhymenochirus merlini
Object organization
Side
NotApplicable
Orientation
--
Short description
microCT volume and derivatives
Full description
Record created by batch submission.
Creator
Jaimi Gray
Date created
--
Date uploaded
October 26, 2023

FILE OBJECT DETAILS Field Definitions

File name
CAS-AMP-230146.zip
File format(s)
ZIP archive, TIFF
File size
342 MB
Image width
489
Image height
1048
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.025264
Y pixel spacing
0.025264
Z pixel spacing
0.025264
Pixel spacing units
Mm
Slice thickness
0.02526417
Number of images in set
1,219

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
California Academy of Sciences
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CAS:HERP:230146 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200.098
Flux normalization
no
Pixel spacing calibration
--
Shading correction
no
Frame averaging
3
Projections
1440
Voltage
80
Power
0.016
Amperage
200
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
2024
Detector pixels size X
0.2
Detector pixels Y
2024
Detector pixels size Y
0.2
Detector configuration
Area (single or tiled detector)
Source object distance
101.40725
Source detector distance
802.77534791
Target material
tungston
Rotation number
--
Phase contrast
no
Optical magnification
no
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000574254: Entire Specimen [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
--
Software
DatosX|R
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000574254: Entire Specimen [CTImageSeries] [CT] (this media)