Media 000598858: Dice Ct Whole Body
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
VIMS:Fish:40875 Ptilichthys goodei
Managed by
Jaimi Gray

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Related Media (0)

Media produced from the same original imaging that created Media 000598858 (this media). Includes all media associated with this media through an imaging and processing workflow.

No related media found.

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Project
· Public

TAGS

GENERAL DETAILS Field Definitions

Media ID
000598858
Media type
Volumetric Image Series
Object element or part
diceCT whole body
Object represented
VIMS:Fish:40875
Object taxonomy
Ptilichthys goodei
Object organization
VIMS Nunnally Ichthyology Collection
Side
--
Orientation
--
Short description
stained with 1.25% buffered Lugol's iodine
Full description
--
Creator
Jaimi Gray
Date created
March 28, 2023
Date uploaded
January 22, 2024

FILE OBJECT DETAILS Field Definitions

File name
VIMS-40875-diceCT.zip
File format(s)
ZIP archive, TIFF
File size
2.65 GB
Image width
903
Image height
825
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.020713
Y pixel spacing
0.020713
Z pixel spacing
0.020713
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
5,833

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Jaimi Gray
Data uploaded by
Jaimi Gray
Publication status
Open Download
Download reviewer
--
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/598858
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object VIMS:Fish:40875 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Jaimi Gray
Event date
March 28, 2023
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
200 ms
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
1500
Voltage
100 kV
Power
--
Amperage
200 uA
Surrounding material
--
X-ray tube type
Tungsten
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000598858: Dice Ct Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
March 28, 2023
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000598858: Dice Ct Whole Body [CTImageSeries] [CT] (this media)