Media 000600637: Forelimb
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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Project
· Public

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No tags found.

GENERAL DETAILS Field Definitions

Media ID
000600637
Media type
Mesh
Object element or part
Forelimb
Object represented
Object taxonomy
Terrapene carolina
Object organization
Side
Right
Orientation
--
Short description
Right forelimb with elements colored to demonstrate forelimb anatomy
Full description
Skeleton of the right forelimb of an eastern box turtle, Terrapene carolina (specimen LSUMZ Herps 84573), a fluid preserved specimen from the Louisiana State Museum of Natural History, with elements colored to demonstrate forelimb anatomy. Scene by Jaimi Gray (oVert team). CT scan segmented and mesh files created using Avizo (version 2019.2). Elements repositioned and colored using Blender and Meshlab. Louisiana State University & Agricultural and Mechanical College provided access to these data provided access to these data, the collection of which was funded by oVert TCN; NSF DBI-1701714; NSF DBI-1701402.
Creator
Jaimi Gray
Date created
January 30, 2024
Date uploaded
January 30, 2024

FILE OBJECT DETAILS Field Definitions

File name
box_turtle_forelimb_with_color.ply
File format(s)
PLY
File size
8.33 MB
Points
174673
Polygons
349314
Map type
--
UV coordinates
True
Vertex color
True
Bounding box dimensions
13.060, 10.078, 4.747
Centroid coordinates
-1.627, -1.202, -0.893
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
--
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF DBI-1701714 ("oVert: TCN" parent grant)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object LSUMZ:Herps:84573 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
0.200098
Flux normalization
Yes
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
3
Projections
1440
Voltage
110
Power
0.022
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000073972: Whole Body [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Zachary Randall
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000073972: Whole Body [CTImageSeries] [Etc] was processed to create derived Media 000600637: Forelimb [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi Gray
Event date
January 30, 2024
Software
VG Studio Max & Blender
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000600637: Forelimb [Mesh] [CT] (this media)