Media 000602395: Forelimb
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000602395
Media type
Mesh
Object element or part
Forelimb
Object represented
Object taxonomy
Trichobatrachus robustus
Object organization
Side
Right
Orientation
--
Short description
--
Full description
Skeleton of the right forelimb of a hairy frog, *Trichobatrachus robustus* (specimen CAS Herp 254134), a fluid-preserved specimen from the California Academy of Sciences, with colored elements to demonstrate forelimb anatomy. This scene was created by Jaimi Gray (oVert team) using pre-existing mesh files (see below) which were edited to separate, reposition, and color elements in Blender and Meshlab. Original model was made by Karina Riddell with Volumegraphics VGStudioMax 3.3 from a CT scan produced by a Phoenix V|Tome|X S. The model was generated to complement a learning activity designed during the UF Center for Precollegiate Education and Training workshop “3D Vertebrates: From Museum Shelves to Classrooms.” Scanning and modeling of this specimen was funded by the oVert project at the University of Florida (NSF DBI 1701714, https://tinyurl.com/oVertwiki).
Creator
Jaimi A Gray
Date created
February 06, 2024
Date uploaded
February 06, 2024

FILE OBJECT DETAILS Field Definitions

File name
hairy_frog_forleimb_with_color.ply
File format(s)
PLY
File size
4.69 MB
Points
97879
Polygons
197024
Map type
--
UV coordinates
True
Vertex color
True
Bounding box dimensions
20.642, 29.573, 7.593
Centroid coordinates
-1.127, 3.488, -0.099
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
California Academy of Sciences
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object CAS:HERP:254134 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.2
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
1800
Voltage
90
Power
0.018
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000027178: Ct Scan Of Skeleton And Skull [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Edward Stanley
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000027178: Ct Scan Of Skeleton And Skull [CTImageSeries] [Etc] was processed to create derived Media 000602395: Forelimb [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Jaimi A Gray
Event date
February 06, 2024
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000602395: Forelimb [Mesh] [CT] (this media)