Media 000125118: Endocasts
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

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Project
· Public
Project
· Public
Team
· Public

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GENERAL DETAILS Field Definitions

Media ID
000125118
Media type
Mesh
Object element or part
Endocasts
Object represented
Object taxonomy
Urocitellus richardsonii
Object organization
Side
--
Orientation
--
Short description
Urocitellus_richardsonii_AMNH15062 endocast
Full description
Migrated MorphoSource 1 Media File Title: Urocitellus_richardsonii_AMNH15062 endocast Migrated MorphoSource 1 Media Group Title: Spermophilus richardsonii AMNH 15062 Migrated MorphoSource 1 Media File Description: From Bertrand et al., 2021. The impact of locomotion on the brain evolution of squirrels and close relatives.
Creator
--
Date created
--
Date uploaded
July 11, 2020

FILE OBJECT DETAILS Field Definitions

File name
Spermophilus_richardsonii_AMNH15062_endocast.stl
File format(s)
STL
File size
702 MB
Points
1829416
Polygons
3658892
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
18.835, 18.345, 30.318
Centroid coordinates
16.608, 9.818, 11.869
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Restricted Download
IP holder
AMNH Dept of Mammalogy
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
--
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Ornella Bertrand and colleagues provided access to these dataOriginally appearing in Bertrand et al., 2021. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object amnh:mammals:15062 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
--
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000091941: Cranium [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
--
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000091941: Cranium [CTImageSeries] [CT] was processed to create derived Media 000125118: Endocasts [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
--
Event date
April 12, 2021
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000125118: Endocasts [Mesh] [CT] (this media)