Media 000386981: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

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Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000386981
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
Object taxonomy
Craugastor rostralis
Object organization
Side
NotApplicable
Orientation
--
Short description
microCT volume, zipped 16-bit tiff stack
Full description
Migrated MorphoSource 1 Media Group Title: microCT volume, zipped 16-bit tiff stack Migrated MorphoSource 1 Media Group Description: Data inverted following reconstruction Record created by batch submission.
Creator
--
Date created
--
Date uploaded
September 28, 2021

FILE OBJECT DETAILS Field Definitions

File name
UCM_Herp_34489_Craugastor_rostralis.zip
File format(s)
ZIP archive, TIFF
File size
1.03 GB
Image width
1003
Image height
1024
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.055789
Y pixel spacing
0.055789
Z pixel spacing
0.055789
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
1,437

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm), Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Colorado Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
oMeso PEN NSF DBI-2001474; oVert TCN partner NSF DBI-1701742
Publisher
University of Colorado Museum of Natural History
Cite as
UCM Herp [catalog number]
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UCM:Herp:UCM:Herp:34489 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Zeiss Xradia 520 Versa x-ray microscope (xrm)
Device facility
Materials Instrumentation and Multimodal Imaging Core Facility (MIMIC) (University of Colorado, Boulder)
Creator
Green, Mariah
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.800000012
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
1437
Voltage
120
Power
0.009840000153
Amperage
0.082000001
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000386981: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Green, Mariah
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000386981: Whole Body [CTImageSeries] [CT] (this media)