Media 000343599: Tibia
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
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GENERAL DETAILS Field Definitions

Media ID
000343599
Media type
Mesh
Object element or part
Tibia
Object represented
Object taxonomy
Nannodectes intermedius
Side
Right
Orientation
--
Short description
--
Full description
Correct chirality. Proximal Tibia Fragment.
Creator
--
Date created
--
Date uploaded
February 02, 2021

FILE OBJECT DETAILS Field Definitions

File name
Boyer_USNM_442229_Tibia_final_0001.labels2.smooth.ply
File format(s)
PLY
File size
54.2 MB
Points
749988
Polygons
1500000
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
11.502, 14.701, 7.802
Centroid coordinates
12.545, 12.456, 7.578
Units of point coordinates
--

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
1 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Smithsonian, National Museum of Natural History
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1317525 (to DM Boyer and ER Seiffert), 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object USNM:PAL:USNM PAL442229 was imaged to create raw Media 000343586: Tibia [CTImageSeries] [CT].

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
--
Event date
February 04, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
2000
Voltage
110
Power
11.99
Amperage
109
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
2000
Detector pixels size X
0.2
Detector pixels Y
2000
Detector pixels size Y
0.2
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

Media produced by this event on MorphoSource

STEP 2: IMAGE PROCESSING

Raw Media 000343586: Tibia [CTImageSeries] [CT] was processed with 1 activity to create derived Media 000343599: Tibia [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Mackenzie Shepard
Event date
February 02, 2021
Software
Avizo 8.1
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Avizo 8.1
Description

Media produced by this event on MorphoSource

Media 000343599: Tibia [Mesh] [CT] (this media)