Media 000098538: Head [CTImageSeries] [Etc]
Represents:
Biological Specimen
In Collection

0 ADDITIONAL MEDIA RELATED TO ACQUISITION EVENT

COLLECTIONS MEDIA BELONGS TO

MEDIA TAGS

FILE OBJECT DETAILS

Media ID
000098538
Media type
CTImageSeries
File format(s)
image/tiff
File size
933 MB
Object element or part
head
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 1192\\r\\n\\r\\nMaisano:\\r\\nHeloderma: Scans of the head of Heloderma horridum (TNHC 64380) for Dr. Jessie Maisano of The University of Texas at Austin and ATOL. Specimen scanned by Matthew Colbert 2 March 2005.\\r\\n\\r\\n16bitrot: 1024x1024 16-bit TIFF images. II, 180 kV, 0.133 mA, no filter, empty container wedge, no offset, slice thickness 2 lines (= 0.1147 mm), S.O.D. 168 mm, 1200 views, 2 samples per view, inter-slice spacing 2 lines (= 0.1147 mm), field of reconstruction 50 mm (maximum field of view 55.05421 mm), reconstruction offset 5100, reconstruction scale 1540. Acquired with 15 slices per rotation. Drift- and ring-removal processing done by Susan Garlock based on correction of raw sinogram data, using IDL routines “RK_SinoDeDrift” and “RK_SinoRingProcSimul,” both with default parameters. Reconstructed off-center with y=2, and with reconstruction angle -2 degrees. Rotation correction processing done by Susan Garlock using IDL routine “DoRotationCorrection.” Total slices = 720.\\r\\n
Creator
--
Date created
--
Date uploaded
January 09, 2020
Image width
988
Image height
895
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.048800
Y pixel spacing
0.048800
Z pixel spacing
0.114700
Pixel spacing units
Mm
Number of images in set
720

IMAGE ACQUISITION AND PROCESSING AT A GLANCE

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS

Data managed by
Data uploaded by
Download permission
Publish with Restricted Download
Download reviewer
IP holder
Texas Natural History Collections
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
EF-0334961, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: oUTCT provided access to these dataoriginally appearing in Gauthier et al., 2012, with data collection funded by NSF EF-0334961 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object tnhc:herpetology:64380 was imaged to create undeposited raw media.

Imaging Details

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Date
--
Software
--
Description
--
Imaging event description attachment
None
Imaging event reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
2
Projections
1200
Voltage
180
Power
--
Amperage
133
Surrounding material
empty container
Xray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixel size X
--
Detector pixels Y
--
Detector pixel size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000098538: Head [CTImageSeries] [Etc] (this media).

Processing Details

Creator
Matthew Colbert
Date processed
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource


Media 000098538: Head [CTImageSeries] [Etc] (this media)