Media 000093300: Trunk
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000093300: Trunk
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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In Collections
Project
· Public
Team
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000093300
Media type
Mesh
Object element or part
trunk
Object represented
Object taxonomy
Indicator exilis pachyrhynchus
Object organization
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
Benson, Roger
Date created
--
Date uploaded
October 31, 2019
FILE OBJECT DETAILS Field Definitions
File name
Indicator_exilis_FMNH_429726_Sternum_furcula_coracoid_scapulae_synsacrum.ply
File format(s)
PLY
File size
878 MB
Points
11153460
Polygons
22326784
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
19356.469, 19869.891, 69002.395
Centroid coordinates
16176.464, 18030.185, 32220.048
Units of point coordinates
Mm
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s, UChicago PaleoCT (University of Chicago)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Field Museum of Natural History
Copyright statement
Creative Commons license
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson
Publisher
--
Cite as
Roger Benson provided access to these data originally appearing in Bjarnason A, Benson RBJ. 2021. A 3D geometric morphometric dataset quantifying skeletal variation in birds. MorphoMuseuM. https://doi.org/10.18563/journal.m3.125, the collection of which was funded by the European Research Council (ERC) starting grant TEMPO (ERC-2015-STG-677774) to Roger Benson. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
FMNH:Birds:429726
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x s
Device facility
UChicago PaleoCT (University of Chicago)
Creator
April Neander
Event date
February 08, 2021
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.5
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1600
Voltage
100
Power
--
Amperage
200
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000093297: Skeleton [CTImageSeries] [CT].
Processing Details Field Definitions
Creator
April Neander
Event date
February 08, 2021
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000093297: Skeleton [CTImageSeries] [CT]
was processed
to create
derived
Media 000093300: Trunk [Mesh] [Etc] (this media).
Processing Details Field Definitions
Creator
TEMPO team
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
Media 000093300: Trunk [Mesh] [Etc] (this media)