Media 000099116: Presacral 2
Open Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
NHMUK:ZOO:1957.1.7.51-52 Rhyacotriton olympicus
Managed by
Roger Benson

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Related Media (19)

Media produced from the same original imaging that created Media 000099116 (this media). Includes all media associated with this media through an imaging and processing workflow.

Parent Media (Top And Direct)

The media that was processed to create Media 000099116 (this media). The media immediately preceding this media in the imaging and processing workflow. Also the media closest to what was produced from original imaging or the media with the least amount of derived processing.

CTImageSeries
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Other Related Media (18)

Other media associated with the original imaging that produced Media 000099116 (this media) excluding those listed above. For example, could include derived media produced from children of this media (grandchildren) or other derived media produced from the top parent of this media (sibling or cousin).

Mesh
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Mesh
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GENERAL DETAILS Field Definitions

Media ID
000099116
Media type
Mesh
Object element or part
presacral 2
Object represented
NHMUK:ZOO:1957.1.7.51-52
Object taxonomy
Rhyacotriton olympicus
Object organization
Natural History Museum (London) Collection Specimens
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: Micro-CT volume and derivative mesh files
Creator
--
Date created
--
Date uploaded
January 17, 2020

FILE OBJECT DETAILS Field Definitions

File name
Rhyacotriton_olympicus_NHMUK_1957.1.7.52_2371_8bit_increment3_Presacral2.ply
File format(s)
PLY
File size
8.6 MB
Points
126337
Polygons
252710
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
2.235, 2.531, 2.501
Centroid coordinates
6.409, 9.120, 71.842
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (0 steps)
Derived directly from
Media 000099112: Whole Body [CTImageSeries] [CT]
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Roger Benson
Data uploaded by
Roger Benson
Publication status
Open Download
Download reviewer
Roger Benson
IP holder
Natural History Museum, London
Copyright statement
 In Copyright
Creative Commons license
 Creative Commons BY-NC Attribution-NonCommercial 4.0 International
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
Leverhulme Trust research project grant RPG-2018-381
Publisher
--
Cite as
Roger Benson provided access to these data, originally appearing in Jones et al. (2022 "Middle Jurassic fossils document an early stage in salamander evolution"), the collection of which was funded by Leverhulme Trust research project grant RPG-2018-381. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M99116
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object NHMUK:ZOO:1957.1.7.51-52 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
School of Earth Sciences Xray Tomography (XTM) Facility (University of Bristol)
Creator
Roger Benson, Tom Davies
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
0.5
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
1
Projections
1401
Voltage
75
Power
--
Amperage
147
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000099112: Whole Body [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Roger Benson, Tom Davies
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000099112: Whole Body [CTImageSeries] [CT]

STEP 3: IMAGE PROCESSING

Derived Media 000099112: Whole Body [CTImageSeries] [CT] was processed to create derived Media 000099116: Presacral 2 [Mesh] [Etc] (this media).

Processing Details Field Definitions

Creator
Roger Benson, Tom Davies
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000099116: Presacral 2 [Mesh] [Etc] (this media)