Media 000114146: Ethmoturbinates
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000114146
Media type
Volumetric Image Series
Object element or part
ethmoturbinates
Object represented
Object taxonomy
Puma concolor
Object organization
Side
--
Orientation
--
Short description
--
Full description
Migrated MorphoSource 1 Media Group Title: HRXCT scan Migrated MorphoSource 1 Media File Description: University of Texas High-Resolution X-ray CT Facility Archive 1538\\r\\n\\r\\nVan Valkenburgh:\\r\\nPuma/male/turbinates: Scans of the skull (turbinates) of a male Puma concolor (LACM 87430) for Blaire Van Valkenburgh of the University of California Los Angeles, Department of Evolutionary and Organismic Biology. Specimen scanned by Matthew Colbert 16 November 2006. RLS settings: running average skip pixels = 2, count pixels = 4.\\r\\n\\r\\n16bit: 1024x1024 16-bit TIFF images. RLS, 419 kV, 1.8 mA, no filter, empty container wedge, 160% offset, gain =2, 128 ms integration time, slice thickness = 0.25 mm, S.O.D. 600 mm, 904 views, 2 rays averaged per view, 1 sample per view, inter-slice spacing = 0.25 mm, field of reconstruction 98 mm (maximum field of view 98.9196 mm), reconstruction offset 8000, reconstruction scale 8000. Ring-removal processing done by Alison Mote based on correction of raw sinogram data using IDL routine “RK_SinoRingProc” with default parameters. Parameter file used for reconstruction to correct for progressive rotation of -4 degrees. Total final slices = 360.\\r\\n\\n\\nRelated URL: http://digimorph.org/specimens/Puma_concolor/male/ Migrated MorphoSource 1 Media Group Description: Related URL: http://digimorph.org/specimens/Puma_concolor/male/
Creator
--
Date created
--
Date uploaded
April 06, 2020

FILE OBJECT DETAILS Field Definitions

File name
File format(s)
ZIP archive, TIFF
File size
505 MB
Image width
1024
Image height
1024
Color space
BlackIsZero
Color depth
16
Compression
Uncompressed
X pixel spacing
0.096000
Y pixel spacing
0.096000
Z pixel spacing
0.250000
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
360

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS scanner with GE Titan X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
Natural History Museum of Los Angeles County
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On Any Repository
Funding attribution
IOB-0517748, DBI-1902242
Publisher
--
Cite as
Migrated MorphoSource 1 Media Citation Instructions: Blaire Van Valkenburgh provided access to these data , with data collection funded by NSF IOB-0517748 and data upload to MorphoSource funded by DBI-1902242. The files were downloaded from www.MorphoSource.org, Duke University.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object LACM:Mammals:87430 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS scanner with GE Titan X-ray source
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
none
Projections
904
Voltage
419
Power
--
Amperage
1800
Surrounding material
empty container
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000114146: Ethmoturbinates [CTImageSeries] [Etc] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000114146: Ethmoturbinates [CTImageSeries] [Etc] (this media)