Media 000170710: Whole Body
Restricted Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
AMNH:Mammals:M-232506 Cynopterus brachyotis
Managed by
AMNH Mammalogy Department

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Media Display

Related Media (1)

Media produced from the same original imaging that created Media 000170710 (this media). Includes all media associated with this media through an imaging and processing workflow.

Child Media (1)

Derived media that were created from processing Media 000170710 (this media). The media immediately below this media in the imaging and processing workflow.

Mesh
· Restricted Download

In Collections

Team
· Public
Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000170710
Media type
Volumetric Image Series
Object element or part
whole body
Object represented
AMNH:Mammals:M-232506
Object taxonomy
Cynopterus brachyotis
Object organization
AMNH Mammal Collections
Side
--
Orientation
--
Short description
HRXCT scan - whole body
Full description
The University of Texas High-Resolution X-ray CT Facility Archive 0497 Rowe: Cynopter: Scans of a whole preserved specimen of Cynopterus brachyotis (AMNH 232506; Malaya, before 1970) for Dr. Nancy Simmons of the American Museum of Natural History and Dr. Timothy Rowe of the Department of Geological Sciences, The University of Texas at Austin. Scanned by Matthew Colbert 14 December 2001. 16bit (slices 1-777): 1024x1024 16-bit TIFF images. II, 150 kV, 0.16 mA, no filter, empty mount wedge, no offset, slice thickness = 2 lines (= 0.1219 mm), S.O.D. 178 mm, 800 views, 3 samples per view, interslice spacing = 2 lines (=0.1219 mm), field of reconstruction 57.0 mm (maximum field of view 57.08536 mm), reconstruction offset 4300, reconstruction scale 2500. Scanned in seven- slice mode. Total slices = 777.
Creator
--
Date created
December 14, 2001
Date uploaded
January 07, 2021

FILE OBJECT DETAILS Field Definitions

File name
16bit.zip
File format(s)
ZIP archive, TIFF
File size
796 MB
Image width
916
Image height
728
Color space
BlackIsZero
Color depth
16
Compression
--
X pixel spacing
0.055700
Y pixel spacing
0.055700
Z pixel spacing
0.121900
Pixel spacing units
Mm
Slice thickness
--
Number of images in set
777

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Varian Medical Systems (Bio-Imaging Research, Inc) ACTIS CT scanner with FeinFocus X-ray source, The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
AMNH Mammalogy Department
Data uploaded by
Barbara Sulbaran
Publication status
Restricted Download
Download reviewer
Jessie Maisano; Neil Duncan; AMNH Mammalogy Department
IP holder
AMNH Dept of Mammalogy
Copyright statement
 Copyright Undetermined
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Permitted
Required archival of published derivatives
On MorphoSource
Funding attribution
DEB-9873663, DBI-1902242
Publisher
oUTCT PEN
Cite as
Nancy Simmons provided access to these data, with data collection funded by NSF DEB-9873663 and data upload to MorphoSource funded by DBI-1902242.
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
 ark:/87602/m4/M170710
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object AMNH:Mammals:M-232506 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
The University of Texas High-Resolution X-ray Computed Tomography Facility (University of Texas at Austin)
Creator
Matthew Colbert
Event date
December 14, 2001
Software
--
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
3
Projections
800
Voltage
150
Power
--
Amperage
160
Surrounding material
empty mount
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000170710: Whole Body [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Matthew Colbert
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000170710: Whole Body [CTImageSeries] [CT] (this media)