Media 000386322: Cranium
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000386322: Cranium
Open Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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GENERAL DETAILS Field Definitions
Media ID
000386322
Media type
Mesh
Object element or part
Cranium
Object represented
Object taxonomy
Callithrix jacchus geoffroyi
Object organization
Side
Midline
Orientation
--
Short description
--
Full description
--
Creator
Alexander Prucha
Date created
September 28, 2021
Date uploaded
September 28, 2021
FILE OBJECT DETAILS Field Definitions
File name
Callithrix-jacchus-f-MCZ-37823-cranium.ply
File format(s)
PLY
File size
25.7 MB
Points
708006
Polygons
1416246
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
29.367, 49.257, 26.595
Centroid coordinates
15.814, 25.687, -14.969
Units of point coordinates
No Value Entered, Millimeter Default
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
2
(0 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology HMX ST 225, Center for Nanoscale Systems (Harvard University)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Open Download
Download reviewer
IP holder
President and Fellows of Harvard College (Copyright and License)
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
Lynn Copes, Lynn Lucas, and the MCZ provided access to this scan, originally appearing in Copes and Kimbel (2016) and Copes et al. (2016), funding for the collection of which was provided by NSF DDIG #0925793, and a Wenner-Gren Foundation Dissertation Grant #8102 (both to Lynn Copes)
Publisher
Museum of Comparative Zoology, Harvard University
Cite as
When re-using this media, please follow all citation provisions of its MorphoSource Reuse Agreement, acknowledge grants in the Funding Attribution field for this media, and cite Almecija et al., 2024 SciData (doi: https://doi.org/10.1038/s41597-024-04261-5).
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
MCZ:Mamm:37823
was imaged to create
undeposited raw media.
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device facility
Center for Nanoscale Systems (Harvard University)
Creator
--
Event date
--
Software
--
Description
--
Description Attachment
None
Photographic Reference
None
Filter
--
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
No
Frame averaging
--
Projections
1000
Voltage
80
Power
0.01
Amperage
125
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
STEP 2: IMAGE PROCESSING
Raw media (undeposited)
was processed
to create
derived
Media 000005203: Element Unspecified [CTImageSeries] [Etc].
Processing Details Field Definitions
Creator
--
Event date
--
Software
--
Description
--
Description attachment
None
Media produced by this event on MorphoSource
STEP 3: IMAGE PROCESSING
Derived
Media 000005203: Element Unspecified [CTImageSeries] [Etc]
was processed
to create
derived
Media 000386322: Cranium [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
Alexander Prucha
Event date
--
Software
AVIZO 7
Description
Any 3D surface uploaded for this specimen/element was produced with either the Isosurface or LabelField functions in AVIZO 7 or later, and it was subsequently processed in Geomagic Studio/Wrap (e.g., cleaning, filling holes).
Description attachment
None