Media 000418480: Tibia
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

In Collections

Project
· Public

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000418480
Media type
Mesh
Object element or part
tibia
Object represented
Object taxonomy
Ignacius clarkforkensis
Object organization
Side
Right
Orientation
--
Short description
--
Full description
--
Creator
Doug Boyer
Date created
February 01, 2022
Date uploaded
February 01, 2022

FILE OBJECT DETAILS Field Definitions

File name
ummp82606_r-tibia.ply
File format(s)
PLY
File size
77.8 MB
Points
1067297
Polygons
2134590
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
6.754, 26.126, 51.073
Centroid coordinates
29.121, 21.158, 35.677
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (4 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
University of Michigan Museum of Paleontology
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1552848 (to DM Boyer) and Duke University Trinity College of Arts and Sciences
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object ummp:vp:82606 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Doug Boyer
Event date
December 16, 2013
Software
CT agent
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
--
Power
--
Amperage
--
Surrounding material
--
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed with 3 activities to create derived Media 000418469: Tibia [CTImageSeries] [CT].

Processing Details Field Definitions

Creator
Doug Boyer
Event date
February 01, 2022
Software
CT agent
Description
reconstruction was done with CT agent in 2013
Description attachment
None

Processing Activity 1: Reconstruction

Software
CT agent
Description

Processing Activity 2: Transform: Reflection

Software
avizo
Description

Processing Activity 3: Crop

Software
avizo
Description

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000418469: Tibia [CTImageSeries] [CT] was processed with 1 activity to create derived Media 000418480: Tibia [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Doug Boyer
Event date
February 01, 2022
Software
avizo
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
avizo
Description

Media produced by this event on MorphoSource

Media 000418480: Tibia [Mesh] [CT] (this media)