Media 000431485: Pelvis, Femur
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
Media 000431485: Pelvis, Femur
Restricted Download
Type
Mesh
Modality
X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by
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Media Display
In Collections
Team
· Public
Project
· Public
TAGS
GENERAL DETAILS Field Definitions
Media ID
000431485
Media type
Mesh
Object element or part
Pelvis; Femur
Object represented
Object taxonomy
Teius teyou
Object organization
Side
--
Orientation
--
Short description
--
Full description
--
Creator
S. Swank
Date created
February 16, 2021
Date uploaded
March 16, 2022
FILE OBJECT DETAILS Field Definitions
File name
Tt.121920.clean.ply
File format(s)
PLY
File size
35.2 MB
Points
2994933
Polygons
72653
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
69.138, 62.306, 38.819
Centroid coordinates
45.880, -18.406, 19.429
Units of point coordinates
--
IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions
Number of parent media
1
Number of processing events
1
(2 steps)
Derived directly from
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Perkin Elmer Quantum GX2, LUC Department of Biology (Loyola University Chicago)
OWNERSHIP AND PERMISSIONS Field Definitions
Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On Any Repository
Funding attribution
NSF DEB-1456462
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
IDENTIFIERS AND EXTERNAL LINKS Field Definitions
MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--
IMAGE ACQUISITION AND PROCESSING IN DETAIL
STEP 1: IMAGE ACQUISITION
Physical object
FMNH:Amphibians and Reptiles:121920
was imaged to create
raw
Media 000431480: Femur, Pelvis [CTImageSeries] [CT].
IMAGING DETAILS Field Definitions
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Device facility
LUC Department of Biology (Loyola University Chicago)
Creator
S. Swank
Event date
February 16, 2021
Software
InVesalius 3.1; MeshLab 2020.12
Description
--
Description attachment
None
Reference attachment
None
Filter
--
Exposure time
4 min
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
--
Projections
--
Voltage
65-70 kV
Power
--
Amperage
100-114 mA
Surrounding material
Plastic bag
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--
Media produced by this event on MorphoSource
STEP 2: IMAGE PROCESSING
Raw
Media 000431480: Femur, Pelvis [CTImageSeries] [CT]
was processed
with 2 activities
to create
derived
Media 000431485: Femur, Pelvis [Mesh] [CT] (this media).
Processing Details Field Definitions
Creator
S. Swank
Event date
February 16, 2021
Software
InVesalius 3.1, MeshLab 2020.12
Description
--
Description attachment
None
Processing Activity 1: Photos to Mesh
Software
InVesalius
Description
created .ply file using a manual threshold
Processing Activity 2:
Software
Meshlab
Description
added landmarks, removed background