Media 000533109: Entire Specimen
Open Download
Type Volumetric Image Series
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000533109
Media type
Volumetric Image Series
Object element or part
entire specimen
Object represented
Object taxonomy
Eleutherodactylus sp.
Side
NotApplicable
Orientation
--
Short description
microCT volume and derivatives
Full description
Record created by batch submission.
Creator
Maria C Vallejo-Pareja
Date created
--
Date uploaded
June 27, 2023

FILE OBJECT DETAILS Field Definitions

File name
UF-UF-494596.zip
File format(s)
ZIP archive, TIFF
File size
31 MB
Image width
517
Image height
543
Color space
BlackIsZero
Color depth
16
Compression
PackBits
Series type
Reconstructed image stack
X pixel spacing
0.003858
Y pixel spacing
0.003858
Z pixel spacing
0.003858
Pixel spacing units
Mm
Slice thickness
0.00385835
Number of images in set
774

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
0
Number of processing events
1 (0 steps)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240, UF Nanoscale Research Facility (University of Florida)

OWNERSHIP AND PERMISSIONS Field Definitions

Data uploaded by
Publication status
Open Download
IP holder
Florida Museum of Natural History
Copyright statement
--
Creative Commons license
--
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Limited
Required archival of published derivatives
On MorphoSource
Funding attribution
OVERT NSF-DBI-170714
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object UF:VP:494596 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
General Electric phoenix v|tome|x m 240
Device facility
UF Nanoscale Research Facility (University of Florida)
Creator
Maria C Vallejo-Pareja
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
333.096
Flux normalization
--
Pixel spacing calibration
--
Shading correction
--
Frame averaging
3
Projections
2200
Voltage
80
Power
0.012
Amperage
150
Surrounding material
air
X-ray tube type
--
Target type
Reflection
Detector type
Scintillator (Phosphor used)
Detector pixels X
2024
Detector pixels size X
0.2
Detector pixels Y
2024
Detector pixels size Y
0.2
Detector configuration
Area (single or tiled detector)
Source object distance
15.417216
Source detector distance
799.16194547
Target material
tungston
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000533109: Entire Specimen [CTImageSeries] [CT] (this media).

Processing Details Field Definitions

Creator
Maria C Vallejo-Pareja
Event date
--
Software
DatosX|R
Description
--
Description attachment
None

Media produced by this event on MorphoSource

Media 000533109: Entire Specimen [CTImageSeries] [CT] (this media)