Media 000570932: Endocast
Restricted Download
Type Mesh
Modality X-Ray Computed Tomography (CT/microCT)
Media represents biological specimen
Managed by

Media Display

TAGS

No tags found.

GENERAL DETAILS Field Definitions

Media ID
000570932
Media type
Mesh
Object element or part
endocast
Object represented
Object taxonomy
Leptadapis magnus leenhardti
Side
Midline
Orientation
--
Short description
manual segmentation of space inside endocranium
Full description
--
Creator
Gabe Yapuncich
Date created
December 08, 2015
Date uploaded
October 11, 2023

FILE OBJECT DETAILS Field Definitions

File name
YPM11481_Leptadapis_endocast_FINAL_smooth.ply
File format(s)
PLY
File size
72.5 MB
Points
1999999
Polygons
3999990
Map type
--
UV coordinates
False
Vertex color
False
Bounding box dimensions
54.722, 34.945, 48.873
Centroid coordinates
38.149, 18.642, 7.357
Units of point coordinates
Mm

IMAGE ACQUISITION AND PROCESSING AT A GLANCE Field Definitions

Number of parent media
1
Number of processing events
2 (1 step)
Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST, Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)

OWNERSHIP AND PERMISSIONS Field Definitions

Data managed by
Data uploaded by
Publication status
Restricted Download
Download reviewer
IP holder
--
Copyright statement
Morphosource use agreement type
Standard
Permits commercial use
Commercial Use Not Permitted
Permits 3D use
3D Printing Prohibited
Required archival of published derivatives
On MorphoSource
Funding attribution
NSF BCS 1440742 (to D. M. Boyer and G. F. Gunnell), 1552848 (to DM Boyer)
Publisher
--
Cite as
--
Media preview mode
Interactive/Embeddable
Additional usage agreement
None

IDENTIFIERS AND EXTERNAL LINKS Field Definitions

MorphoSource ARK
MorphoSource DOI
Not assigned
External identifier
--
External media URL
--

IMAGE ACQUISITION AND PROCESSING IN DETAIL

STEP 1: IMAGE ACQUISITION

Physical object YPM:VP:YPM VPPU 011481 was imaged to create undeposited raw media.

IMAGING DETAILS Field Definitions

Modality
X-Ray Computed Tomography (CT/microCT)
Device
Nikon Metrology XT H 225 ST
Device facility
Duke Shared Materials Instrumentation Facility (SMiF) (Duke University)
Creator
Callie Crawford, Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None
Reference attachment
None
Exposure time
--
Flux normalization
No
Pixel spacing calibration
--
Shading correction
Yes
Frame averaging
1
Projections
1800
Voltage
170
Power
0.01445
Amperage
85
Surrounding material
air
X-ray tube type
--
Target type
--
Detector type
--
Detector pixels X
--
Detector pixels size X
--
Detector pixels Y
--
Detector pixels size Y
--
Detector configuration
--
Source object distance
--
Source detector distance
--
Target material
--
Rotation number
--
Phase contrast
--
Optical magnification
--
Acquisition type
--

STEP 2: IMAGE PROCESSING

Raw media (undeposited) was processed to create derived Media 000006775: Cranium [CTImageSeries] [Etc].

Processing Details Field Definitions

Creator
Callie Crawford, Doug Boyer
Event date
--
Software
--
Description
--
Description attachment
None

Media produced by this event on MorphoSource

STEP 3: IMAGE PROCESSING

Derived Media 000006775: Cranium [CTImageSeries] [Etc] was processed with 1 activity to create derived Media 000570932: Endocast [Mesh] [CT] (this media).

Processing Details Field Definitions

Creator
Gabe Yapuncich
Event date
December 08, 2015
Software
Avizo
Description
--
Description attachment
None

Processing Activity 1: Reconstructed Tomography to Mesh

Software
Avizo
Description
manual segmentation of endocranial cavity

Media produced by this event on MorphoSource

Media 000570932: Endocast [Mesh] [CT] (this media)